__pycache__*
_data*
corpora/
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*.xml
htmlcov/
secrets.env
.coverage
*.sqlite
/logs
tmp/
.venv/
.pytest_cache/
.claude/
.worktrees/
llm_response.txt
text_download/apis/clients/am_phyto_soc.py
text_download/apis/clients/copernicus.py
evals/
download_results.xlsx
biomarkit_manuscript.docx
cover_letter_bioinformatics.docx
ST1.csv
