.gitignore
Readme.md
run_profile.py
setup.py
graph_kmer_index/__init__.py
graph_kmer_index/bionumpy_wrapper.py
graph_kmer_index/collision_free_kmer_index.py
graph_kmer_index/command_line_interface.py
graph_kmer_index/count_min_sketch_kmer_counter.py
graph_kmer_index/critical_graph_paths.py
graph_kmer_index/cython_kmer_index.pyx
graph_kmer_index/cython_reference_kmer_index.pyx
graph_kmer_index/flat_kmers.py
graph_kmer_index/indel_kmer_finder.py
graph_kmer_index/index_bundle.py
graph_kmer_index/kmer_counter.py
graph_kmer_index/kmer_finder.py
graph_kmer_index/kmer_frequency_index.py
graph_kmer_index/kmer_hashing.py
graph_kmer_index/logn_hash_map.py
graph_kmer_index/multi_value_hashtable.py
graph_kmer_index/nplist.py
graph_kmer_index/npset.py
graph_kmer_index/read_kmers.py
graph_kmer_index/reference_kmer_index.py
graph_kmer_index/reverse_kmer_index.py
graph_kmer_index/shared_mem.py
graph_kmer_index/snp_kmer_finder.py
graph_kmer_index/structural_variants.py
graph_kmer_index/unique_kmer_index.py
graph_kmer_index/unique_variant_kmers.py
graph_kmer_index/variant_nodes_index.py
graph_kmer_index.egg-info/PKG-INFO
graph_kmer_index.egg-info/SOURCES.txt
graph_kmer_index.egg-info/dependency_links.txt
graph_kmer_index.egg-info/entry_points.txt
graph_kmer_index.egg-info/not-zip-safe
graph_kmer_index.egg-info/requires.txt
graph_kmer_index.egg-info/top_level.txt
tests/test_collision_free_kmer_index.py
tests/test_count_min_sketch_kmer_counter.py
tests/test_critical_graph_paths.py
tests/test_indexes2.py
tests/test_kmer_finder.py
tests/test_kmer_hashing.py
tests/test_multi_value_hashtable.py
tests/test_nplist.py
tests/test_npset.py
tests/test_readme.py
tests/test_reference_kmer_index.py
tests/test_reverse_kmer_index.py
tests/test_shared_memory.py
tests/test_snp_kmer_finder.py
tests/test_structural_variants.py
tests/test_variant_kmers.py