Metadata-Version: 1.1
Name: phylovega
Version: 0.1
Summary: Interactive Phylogenetic trees in Vega
Home-page: https://github.com/Zsailer/phylovega
Author: Zach Sailer
Author-email: zachsailer@gmail.com
License: MIT
Description-Content-Type: UNKNOWN
Description: 
        # PhyloVega
        
        **Visualize phylogenetic trees in Vega from Python.**
        
        ![](docs/phylovega-example.gif)
        
        ## How does it work?
        
        PhyloVega defines a strict Vega specification that works best for phylogenetic trees. It accepts a PhyloPandas DataFrame as input and
        translates it to a Vega `data` field. It then creates a series of Vega
        `transform`s to construct a hierarchical tree visualization.
        
        ## In the works
        
        Here is a list of features that will eventually make it into PhyloVega.
        
        * Interactive!
        * Circular trees
        * ... (feel free to add to this list).
        
        ## Install
        
        Get the latest release with `pip`:
        
        ```
        pip install phylovega
        ```
        
        Install the development version by cloning this repo and calling:
        ```
        pip install -e .
        ```
        
        ## Dependencies
        
        PhyloVega uses the Vega3 specification. To use in the jupyter notebook, you must install the following Python dependencies.
        
        * [PhyloPandas](https://github.com/Zsailer/phylopandass): Pandas DataFrame for Phylogenetics
        * [ipyvega](https://github.com/vega/ipyvega): IPython/Jupyter notebook module for Vega and Vega-Lite (a visualization grammar).
        
Platform: UNKNOWN
Classifier: Programming Language :: Python
Classifier: Programming Language :: Python :: 3.3
Classifier: Programming Language :: Python :: 3.4
Classifier: Programming Language :: Python :: 3.5
Classifier: Programming Language :: Python :: 3.6
Classifier: Programming Language :: Python :: Implementation :: CPython
Classifier: Programming Language :: Python :: Implementation :: PyPy
